Erin’s Recipe Rundown

Texture: Soft and tender, never crumbly.

Taste: Buttery shortbread and fruity jam.

Ease: Fun and easy to make!

Top Tips: Freeze the cookies before baking so that they hold their shape and don’t absorb the jam.

Recommended GF Flour: I like to use King Arthur Flour Gluten-Free Measure-for-Measure Flour for this recipe. It’s high-quality and contains xanthan gum.

Would I make these again? Absolutely! I love how these cookies are so customizable — you can keep it simple with store-bought jam or take time to make homemade preserves, all while choosing the flavors you love most!

xoxo erin

jam-filled thumbprint cookies stacked on a white scalloped plate.
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This post was originally published in December 2022. It was updated with new photos and instructions in November 2024.

They’re buttery, but fruity. They’re traditional, but unique. They’re simple, but delicious. These iconic Christmas cookies are a must for the holiday season!

These gluten-free thumbprint cookies are a great baking projects to do with young kids too! They’ll love pressing their thumbs into the center of each cookie, then adding a small spoonful of jam. This recipe offers festive fun for the whole family!

Why this recipe works

After testing this recipe repeatedly, I’ve found the key to gluten-free thumbprint cookies that hold their shape and don’t absorb the jam into the cookie dough is to freeze the cookies before baking.

Ingredients You’ll Need

Here are a few notes on some of the key ingredients to make these gluten-free thumbprint cookies. Jump to the recipe card below for the exact measurements.

thumbprint cookie ingredients measured and labeled.
  • Gluten-free flour: I recommend using a high-quality gluten-free measure-for-measure flour that contains xanthan gum as a binder. This will prevent the cookies from being too crumbly and ensure the right texture.  This is my favorite brand.
  • Cornstarch: Cornstarch helps to lighten up the gluten-free flour blend for perfectly tender cookies.
  • Egg yolk: I only use 1 egg yolk (not the whole egg!) for these cookies so they keep their shape. One large egg yolk adds richness and helps bind the dough together without causing the cookies to puff up too much while they bake.
  • Jam/preserves: You can use your favorite jam or preserves for this recipe: strawberry jam, blueberry preserves, orange marmalade…any kind will taste amazing! Raspberry jam is my favorite.

For more shortbread-like cookies, try these gluten-free snowball cookies, gluten-free shortbread cookies and gluten-free almond cookies.

How to Make Gluten-Free Thumbprint Cookies

Here’s an overview of how to make these thumbprint cookies. You can jump to the recipe for the full instructions!

steps 1 and 2 whip butter until smooth and add sugars.
  • In bowl of stand mixer: Beat the butter until light and fluffy (about 2 minutes). You can use a large bowl and an electric hand mixer if you don’t have a stand mixer!
  • Add sugar: Mix in the granulated and brown sugar on medium-high speed until light and fluffy (about 1-2 minutes).
steps 3 and 4 mix in egg yolk and vanilla then dry ingredients.
  • Add egg and vanilla: Mix in the egg yolk and vanilla until combined.
  • Add dry ingredients: Mix in the gluten-free flour, cornstarch, and salt on low speed for 30 seconds then increase to medium speed until a thick dough forms (about 2-3 minutes).
steps 5 and 6 shape, freeze, and jam, and bake.
  • Shape and freeze: Scoop out the dough and roll into balls. I like to use a one-tablespoon cookie scoop or measuring tablespoon to get the right amount! (Option to also roll the dough balls in granulated sugar.) Place on prepared plate or small baking sheet that will fit in the freezer. Use your thumb (or the handle of a large wooden spoon) to press down the center of each dough ball. Smooth any cracks on the edges! Freeze for 20 minutes.
  • Add jam and bake: Remove the dough from the freezer and spoon in about 1/2 teaspoon of jam or preserves into the center of each cookie. (To make it easier, you can put the preserves into a small ziplock bag, cut one corner, then pipe the preserves into each cookie.) Don’t overfill! Freeze the cookies for another 15-20 minutes, then transfer the cookies to the prepared baking sheet and bake until they start to turn golden brown (about 12 minutes). Let cool on the baking sheet for 10 minutes, then move to a wire rack and cool the rest of the way. Repeat until all the dough is used. Enjoy!

You also might like these gluten-free brownies!

Make-Ahead/Storage/Freezing Instructions

  • To Make-Ahead: The dough can be made 1-2 days in advance. Wrap the dough tightly in plastic wrap and refrigerate. When ready to bake, add jam, freeze, and bake according to recipe. Or you can freeze the dough for up to 2 months.
  • To Store: Store leftovers in an airtight container at room temperature for up to 3 days or in the refrigerator for up to 1 week.
  • To Freeze (dough): Shape dough and create indentations, then freeze on a baking sheet until solid. Transfer to an airtight container or freezer bag. Freeze for up to 2 months. Add jam, freeze, and bake according to recipe.
  • To Freeze (baked): Cool cookies completely, then freeze on a baking sheet until solid. Transfer to an airtight container or freezer bag and freeze for up to 2 months. Thaw at room temperature.

Can these gluten-free thumbprint cookies be made dairy-free?

Yes, they can be made dairy-free with a few adjustments! Swap out the butter for vegan butter, but keep an eye on the dough since vegan butter can soften faster and cause more spreading. You may need to freeze the dough longer or even add a tiny bit more flour so that it’s thick and firm before baking.

Why did my thumbprint cookies go flat?

Thumbprint cookies may go flat if the butter or dough is too warm. I like to chill my cookie dough balls before baking to ensure they are thick and chewy. Plus freezing the dough helps the jam from soaking into the cookies as they bake!

How do I keep the gluten-free thumbprint cookies from spreading?

You can keep these cookies from spreading by freezing the dough before baking to ensure the butter is cold and the dough firm when the cookies go in the oven.

How do I make sure the gluten-free thumbprint cookies turn out moist?

Egg yolk is essential for making these moist gluten-free cookies! Too much flour can also dry out the dough, so make sure you follow the recipe exactly and keep the dry and wet ingredients balanced.

  • Use any kind of jam or preserves you like. My favorite is raspberry preserves. You can even use lemon curd or chocolate ganache, if you prefer!
  • Freezing the cookie dough helps the cookies keep their shape.
  • Adding the jam/preserves halfway through freezing ensures that it stays in the center of the cookie and doesn’t absorb into the dough as they bake.
jam-filled thumbprint cookies on a countertop.
jam-filled thumbprint cookies scattered on a countertop.
5 from 20 votes

Gluten-Free Thumbprint Cookies

Prep Time 20 minutes
Cook Time 12 minutes
Chilling Time 40 minutes
Total Time 1 hour 12 minutes
Servings 24 cookies
Buttery, shortbread filled cookies with delicious jam! These gluten-free thumbprint cookies are a Christmas classic you'll love making every holiday season!
My #1 tip for gluten-free thumbprint cookies that don't spread or absorb the jam – freeze the cookies before baking!
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Ingredients

  • 1 cup (226g) butter at room temperature
  • 1/3 cup (70g) granulated sugar (plus more for rolling)
  • 1/3 cup (70g) brown sugar packed
  • 1 large egg yolk
  • 1 teaspoon vanilla extract
  • 2 cups (300g) gluten-free measure-fore-measure flour
  • 2 tablespoons cornstarch
  • ½ teaspoon kosher salt
  • ½ cup (165g) jam or preserves of choice I prefer raspberry preserves

Instructions 

  • In the bowl of a stand mixer (or use a large bowl with an electric hand mixer), add the butter. Beat for 2 minutes until light and fluffy.
  • Add the granulated sugar and light brown sugar. Mix on medium-high speed until light and fluffy, another 1-2 minutes.
  • Add the egg yolk and vanilla and mix to combine.
  • Add the gluten-free flour, cornstarch and salt. Mix on low speed, then after 30 seconds increase the speed to medium. Mix for 2-3 minutes until a thick dough forms.
  • Line a flat plate or small baking sheet with parchment paper. (One that will fit in your freezer!) Using a one-tablespoon cookie scoop or measuring tablespoon, measure out the cookie dough, roll into balls, roll each one in granulated sugar (optional), then place on the parchment-lined plate.
  • Use your thumb (or the handle of a large wooden spoon) to press an indentation into each ball of cookie dough. Smooth any seams or cracks on the edges of the cookie.
  • Freeze the cookie dough balls for 20 minutes.
  • Spoon a scant 1/2 teaspoon of preserves/jam into the indentation in each one. (You can make this easier by scooping the preserves into a small ziplock bag and clipping the edge of the bag, then piping a little bit into each cookie. Do not overfill.)
  • Freeze for another 15-20 minutes. Preheat the oven to 375°F. Line a baking sheet with parchment paper or a silicone baking mat.
  • Place the cookies at least 2" apart on a parchment paper-lined cookie sheet and bake for 12 minutes, until starting to turn golden brown.
  • Let the cookies cool on the baking sheet for 10 minutes. Then transfer to a wire cooling rack. Repeat baking the remaining dough. Enjoy!

Notes

Gluten-Free:  Use a high-quality gluten-free measure-for-measure flour that contains xanthan gum as a binder.  This is my favorite brand.
Jam/Preserves: Use any kind of jam or preserves you like, or even lemon curd or chocolate ganache, if you prefer! My favorite is raspberry preserves. 
To Make-Ahead: The dough can be made 1-2 days in advance. Wrap the dough tightly in plastic wrap and refrigerate. When ready to bake, add jam, freeze, and bake according to recipe. Or you can freeze the dough for up to 2 months.
To Store: Store leftovers in an airtight container at room temperature for up to 3 days or in the refrigerator for up to 1 week.
To Freeze (dough): Shape dough and create indentations, then freeze on a baking sheet until solid. Transfer to an airtight container or freezer bag. Freeze for up to 2 months. Add jam, freeze, and bake according to recipe.
To Freeze (baked): Cool cookies completely, then freeze on a baking sheet until solid. Transfer to an airtight container or freezer bag and freeze for up to 2 months. Thaw at room temperature.

Nutrition

Calories: 149kcal | Carbohydrates: 19g | Protein: 1g | Fat: 8g | Saturated Fat: 5g | Polyunsaturated Fat: 0.4g | Monounsaturated Fat: 2g | Trans Fat: 0.3g | Cholesterol: 28mg | Sodium: 113mg | Potassium: 13mg | Fiber: 1g | Sugar: 10g | Vitamin A: 247IU | Vitamin C: 1mg | Calcium: 14mg | Iron: 0.4mg

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Hi, I'm Erin!

BS Food Science,

MS Nutrition

I believe you can make amazing, gluten-free food with everyday ingredients that everyone will enjoy. I'm here to share my tried-and-true recipes with you!

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Comments

  1. 5 stars
    I made these exactly how the recipe said. They were amazing!! Everyone loved them. For some reason they had a very salty aftertaste but still 5/5

    1. Hi Ulyana, thanks so much for the positive review! Glad you enjoyed them! Maybe cut back a tiny bit on the salt next time if you prefer!

  2. 5 stars
    These make very cute grinch cookies as well. Just add green dye to the dough and when you press them out, press a heart shape in the middle. Use red jam to really make them pop.

  3. 5 stars
    Tried this recipe for the first time this year and they are so tasty! The only problem I ran into, which could be my own appliance, was that the bottoms of my cookies burned. My oven is just a little over a year old. Thinking I’ll try the next batch at 350 degrees for 12min. Thanks for doing the leg work and figuring out some incredible recipes for us!!!

    1. Hi Melissa, sorry they didn’t turn out quite as anticipated! Yes, you could turn down the temperature and/or bake for a shorter time.

5 from 20 votes (8 ratings without comment)

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