Looking for an EASY and crowd-pleasing gluten-free thanksgiving dessert? These gluten-free crustless pumpkin pie cupcakes are it!
With dozens of 5-star reviews, this recipe continues to be a treasured reader and family-favorite. It’s my #1 thanksgiving recipe!
This recipe was originally published in 2015. It was updated with new photos and step-by-step instructions in 2022. I hope you enjoy the crustless pumpkin pie as much as we do!

If you’re yet to master the art of gluten-free pie crust making, these pumpkin pie cupcakes are for you! Even if you have mastered the art of gluten-free pie crust making (tell me your secrets…) these cupcakes are amazingly delicious.
They are a cross between pumpkin pie and a cupcake. Skeptical? You’ll have to taste to believe it!
VIDEO: See how to make it!
(Original photo from 2015!)

Jump to:
Why You’ll Love this Recipe
These gluten-free pumpkin pie cupcakes are perfect for gluten/dairy-free guests at Thanksgiving.
Coconut milk replaces regular milk, but nobody will notice or taste the coconut. All they’ll taste is creamy, custardy, spiced pumpkin deliciousness.
These are so easy to make and can be made a day in advance, which is always a lifesaver at holiday gatherings.
I didn’t think anything could ever compare to traditional pumpkin pie, but these cupcakes are right up there with the best pumpkin desserts I’ve ever tasted!
For more gluten-free thanksgiving dinner recipes, check out this gluten-free gravy, gluten-free stuffing, gluten-free rolls and gluten-free cornbread stuffing.
Feel like making crust? Check out this Gluten-Free Pumpkin Pie! You also might like these collections of gluten-free thanksgiving recipes or gluten-free thanksgiving desserts.
Ingredients You’ll Need

Here are a few notes on the key ingredients to make this crustless pumpkin pie recipe:
- Canned pumpkin: I like to use canned Libby’s 100% pure pumpkin. Any can of pumpkin will work. Just do NOT use pumpkin pie filling!
- Coconut milk: Coconut milk makes a delicious pumpkin pie custard! I also love using coconut milk to keep these gluten and dairy-free! You could also use evaporated milk if you prefer.
- Sugar + brown sugar: Brown sugar adds sweetness and a hint of molasses flavor — the perfect compliment to the pumpkin spices. I don’t find these to be overly sweet but if you’d like to reduce the sugar I suggest reducing the white sugar to 1/4 cup. Check the comments for information about sugar substitutes!
- Gluten-Free flour: A little gluten-free flour gives these crustless pumpkin pie cupcakes some structure. Any brand you have on hand will work!
How to Make Gluten-Free Crustless Pumpkin Pie

- Preheat the oven to 350F. Line a muffin pan with paper liners (or silicone muffin liners).Generously spray the bottoms and sides of the liners with cooking spray.
- In a large mixing bowl, mix together the pumpkin, granulated sugar, brown sugar, eggs and egg yolk, vanilla, and coconut milk until smooth.

- In another bowl, sift together the flour blend, pumpkin pie spice, salt, baking soda, and baking powder.
- Add the dry ingredients to the wet and stir to fully combine.


- Scoop the pumpkin filling into the prepared muffin pan. The cups will be fairly full. Bake the cupcakes for 25 minutes.

- Let the cupcakes cool in the pan for 30 minutes. Refrigerate for at least 1 hour before serving. Nothing better than creamy pumpkin pie! Top with coconut milk or use heavy cream to make homemade whipped cream and a dusting of ground cinnamon. Enjoy!

Tips for Success
MUFFIN LINERS: The kind of cupcake liners you use for this recipe matters. I like using a higher quality liner (this kind) because nothing sticks to them! You can also spray the liners lightly with nonstick cooking spray for extra guarantee they won’t stick.
THEY WILL SINK – THAT’S NORMAL: These are not a true cupcake or a true pumpkin pie. They’re a wonderfully delicious cross between the two, so set your expectations right. They will sink slightly in the middle as they cool and that’s totally normal. Fill that hole up with whipped cream and nobody will complain!
Make-Ahead/Storage
MAKE-AHEAD: For best results, recommend making these in advance! They are best when they’ve chilled overnight.
STORAGE: Cover any leftover cupcakes in an airtight container in the refrigerator, or on a plate tightly covered with plastic wrap for up to 5 days.

MORE GLUTEN-FREE THANKSGIVING DESSERTS
I hope you enjoy these gluten-free crustless pumpkin pie cupcakes as much as we do! If you try this recipe, be sure to leave me a comment/rating below. Have a happy holiday season!

Gluten-Free Crustless Pumpkin Pie Cupcakes (Dairy-Free)
Video
Ingredients
- 15 ounce can pumpkin puree
- 1/2 cup granulated sugar
- 1/4 cup lightly packed brown sugar
- 2 large eggs
- 1 large egg yolk
- 1 teaspoon pure vanilla extract
- 3/4 cup canned coconut milk
- 1/2 cup gluten-free all-purpose flour blend
- 2 teaspoons pumpkin pie spice
- 1/2 teaspoon salt
- 1/4 teaspoon baking soda
- 1/4 teaspoon baking powder
For Topping:
- Coconut milk whipped cream I use So Delicious CocoWhip
Instructions
- Preheat the oven to 350F. Line a muffin pan with paper liners (or silicone muffin liners).Generously spray the bottoms and sides of the liners with cooking spray.
- In a large bowl, mix together the pumpkin, granulated sugar, brown sugar, eggs and egg yolk, vanilla, and coconut milk until smooth.
- In another bowl, sift together the flour blend, pumpkin pie spice, salt, baking soda, and baking powder.
- Add the dry ingredients to the wet and stir to fully combine.
- Scoop the batter into the prepared muffin pan. The cups will be fairly full. Bake the cupcakes for 25 minutes.
- Let the cupcakes cool in the pan for 30 minutes. Refrigerate for at least 1 hour before serving. Top with coconut milk or regular whipped cream. Enjoy!
Notes
- COCONUT MILK: For best results, use full-fat canned coconut milk in this recipe. Do not use boxed or refrigerated coconut milk in place of the canned coconut milk.
- MUFFIN LINERS: The kind of cupcake liners you use for this recipe matters. I like using a higher quality liner (this kind) because nothing sticks to them! You can also spray the liners lightly with nonstick cooking spray for extra guarantee they won’t stick.
- THEY WILL SINK – THAT’S NORMAL: These are not a true cupcake or a true pumpkin pie. They’re a wonderfully delicious cross between the two, so set your expectations right. They will sink slightly in the middle as they cool and that’s totally normal. Fill that hole up with whipped cream and nobody will complain!
Make-Ahead/Storage
- MAKE-AHEAD: For best results, recommend making these in advance! They are best when they’ve chilled overnight.
- STORAGE: Cover any leftover cupcakes in an airtight container in the refrigerator, or on a plate tightly covered with plastic wrap for up to 5 days.
Nutrition

These were amazing! I made them for Thanksgiving and really enjoyed them and I love that they are not too sweet! Thanks for sharing your recipe! I’ll definitely make them again.
So delicious and you’d never miss the dairy or gluten. Perfect balance between cake and pie. I only had regular sugar but put a bit of molasses in the mix.
These are so so good and so much easier than pumpkin pie. And they’re gluten-free!! I love that they are in little cupcakes so I can eat some and freeze some in nice little single serving sizes.
Can you make these the night before if kept refrigerated?
Yes! In fact I recommend that. They are best when they’re refrigerated overnight.
Can I freeze the muffins?
These don’t freeze very well unfortunately! You can make them up to 3 day in advance though 🙂
Can you use paper liners?
Can you use plain milk?
These might stick to regular paper liners so I would grease them generously. Plain milk works great!
This is the absolute best “pumpkin pie” dessert I’ve EVER had! It’s easy to make with simple ingredients and I will never again try to make another GF pumpkin pie. Definitely not when I can whip these up and EVERYONE loves them!
I’m so happy it turned out for you! They are definitely way easier than pumpkin pie 🙂
Can egg substitutes be used in these recipes?
Unfortunately the eggs are crucial for this recipe. The cupcakes would turn out gummy without them.
Can I use Egg Replacer for the eggs? Thank you!!!
Unfortunately the eggs are crucial for this recipe. The cupcakes would turn out gummy without them.
Hi there, Question, could you ice these instead of using whipped topping or are they too spongy? I am not a fan of whipped cream and wanted to sub-in something else.
Thanks
Marya
Great question! I don’t think these would be good with regular icing. They really are meant to be mini pies instead of mini cupcakes.
These are perfect! Can’t wait to make again. TY 🙂
I’m so glad they turned out for you!
This looks SO GOOD. This is going to be perfect for my GF DF husband at Thanksgiving. Thanks!
Has this been attempted to be baked as one cake in a springform pan?
Can the 1/2 cup of gf flour be substituted with almond flour?
I haven’t tried that myself but I think that might work! Let me know if you try it!
So I tried it and I added about 3/4 cup of almond flour. I searched the net and found one website saying it was a 1 to 1 sub, and another saying to add more, but that was subbing from regular flour. So I winged it. I figured if I put too much they’d turn out more like a muffin than custard. They turned out pretty good. They flopped in the middle as expected and the flavor was exactly like a pumpkin pie, so I’m happy :). Thanks for the recipe Erin!
Utter failure! What did I do wrong? I followed the instructions and these completely sunk in the middle!
These aren’t a failure if they sink in the middle! There are several notes to expect that in the blog post and recipe card. They aren’t a regular cupcake – more of a custard. They will sink in the middle and once they are chilled in the fridge you can fill it in with whipped cream.